What if you create the directory manually (both ftom GUI and cconsole using "mkdir"), would it be also locked?

When using synchronize from the command prompt it will automatically see new directories and create the new directories on the remote machine. However, the new directory it creates on the remote machine is locked. When I login to the remote machine as administrator I can't delete the directory or the files in it. Any help or explanation is much appreciated.

Thanks,
dread