After some reading this may happen because some winSCP settings are stored in CURRENT_USER in regdb.
My question is if it possible to export my winSCP reg to another container such as LOCAL_MACHINE or USERS so it would work even though im not logged on the machine? Or am I way off here?
Edit: I also have managed to generate a .ini if that could help. Iv made a bat file with this code; "winscp.exe /ini="C:\Program Files (x86)\WinSCP\WinSCP.ini" but when I run it, it just starts winscp.exe. I also tried with winscp.com /ini="C:\blabla" but that does not seem to sync files
Edit2: Ok my scheduled task now starts a bat file which contains this;
winscp.com /log="C:\Program Files (x86)\WinSCP\log\winSCP.log" /ini="C:\Program Files (x86)\WinSCP\WinSCP.ini" /script="C:\Program Files (x86)\WinSCP\synchronizescript.txt"
It runs and works. Now I hope it will keep running for ever- I will post back